Plot number of barcode lost — plot_barcode_lost • ScreenR

This function plots the number of barcode lost in each sample. Usually lots of barcodes lost mean that the sample has low quality.

Usage

plot_barcode_lost(
  screenR_Object,
  palette = NULL,
  alpha = 1,
  legende_position = "none"
)

Arguments

screenR_Object: The ScreenR object obtained using the create_screenr_object
palette: A vector of colors to be used to fill the barplot.
alpha: A value for the opacity of the plot. Allowed values are in the range 0 to 1
legende_position: Where to positioning the legend of the plot. Allowed values are in the "top", "bottom", "right", "left", "none".

Value

Returns the plot displaying the number of barcode lost in each sample

Examples

object <- get0("object", envir = asNamespace("ScreenR"))

plot_barcode_lost(object)