Returns the Day (time point) and the Treatment of each sample,
as used by the analysis. They come from the sample_table given to
create_screenr_object or, when it was not given, from the
sample names (Day_Treatment_Replicate). Use this function to check that
the samples are interpreted correctly, and to find the values to give
to the day, treatment and control arguments of functions such as
compute_metrics and find_time_hit.
Arguments
- screenR_Object
The ScreenR object obtained using
create_screenr_object.
Value
A tibble with the columns Sample, Day and Treatment (and any other column of the sample_table).
Examples
object <- get0("object", envir = asNamespace("ScreenR"))
get_sample_table(object)
#> # A tibble: 14 × 3
#> Sample Day Treatment
#> <chr> <chr> <chr>
#> 1 T1 T1 T1
#> 2 T2 T2 T2
#> 3 Time3_TRT_A Time3 TRT
#> 4 Time3_TRT_B Time3 TRT
#> 5 Time3_TRT_C Time3 TRT
#> 6 Time3_A Time3 Time3
#> 7 Time3_B Time3 Time3
#> 8 Time3_C Time3 Time3
#> 9 Time4_TRT_A Time4 TRT
#> 10 Time4_TRT_B Time4 TRT
#> 11 Time4_TRT_C Time4 TRT
#> 12 Time4_A Time4 Time4
#> 13 Time4_B Time4 Time4
#> 14 Time4_c Time4 Time4